RNA

Genetic research

Bioinformatics Pipeline Detects Mitochondrial DNA Variants with High Accuracy

Researchers from Maastricht University have developed a novel bioinformatics pipeline that effectively detects homoplasmic and heteroplasmic mitochondrial DNA (mtDNA) single nucleotide variants (SNVs) in single-cell RNA sequencing (scRNA-seq) data. The pipeline includes quality control, alignment to the mitochondrial genome, SNV calling, and annotation, and filters out sequencing errors. This breakthrough

RNA

Bioinformatics Pipeline Detects Mitochondrial DNA Variants with High Accuracy

Researchers from Maastricht University have developed a novel bioinformatics pipeline that effectively detects homoplasmic and heteroplasmic mitochondrial DNA (mtDNA) single nucleotide variants (SNVs) in single-cell RNA sequencing (scRNA-seq) data. The pipeline includes quality control, alignment to the mitochondrial genome, SNV calling, and annotation, and filters out sequencing errors. This breakthrough

RNA

Researchers Uncover Novel Mechanism for Cadmium Tolerance in Switchgrass

Researchers at Inner Mongolia Agricultural University have identified a novel mechanism by which N-methyladenosine (mA) methyltransferase PvFIP37 enhances cadmium (Cd) tolerance in switchgrass. According to their study, published in the Plant Biotechnology Journal, PvFIP37 activates vacuole transport and glutathione detoxification pathways to increase switchgrass Cd tolerance. This finding provides valuable

Biochemistry

Nucleotide-Specific RNA Conformations and Dynamics in Ribonucleoprotein Condensates Discussed in New Study

A recent study published in bioRxiv has shed light on the complex interactions between RNA and proteins in ribonucleoprotein (RNP) condensates. Researchers at Cornell University, led by Qingyue Hu, used contrast-variation solution X-ray scattering and ensemble-based structural modeling to characterize the conformational changes of flexible poly-A, poly-U, and poly-C single-stranded